International Centre for Genetic Engineering and Biotechnology

Practical Course

"Bioinformatics: Computer Methods in Molecular and Systems Biology"

 


 

AREA Science Park - Trieste, ITALY

25 - 29 June 2018

 

PRELIMINARY PROGRAMME

 

 

 MONDAY, 25 June

08:00

Pick-up from Hotel Roma

 

08:30

Course Registration

ICGEB Foyer, 'W' Building

09:15

Welcome Address

ICGEB Seminar room, 'W' Building

09:30

Bioinformatics and knowledge representation: theoretical intro to the course

Sándor Pongor, Pázmány University, Budapest, HU
 Get Tutorial

10:45

Coffee break

‘C’ Building, Area Science Park

11:15

The course computer infrastructure

Leonardo Mariño-Ramirez, NCBI, NIH, Bethesda, MD, US,
Christoph W. Sensen, Technical University, Graz, Austria
 Get Tutorial

12:30

Bioinformatics Databases

Sándor Pongor
 Get Tutorial
13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Sequence analysis, database searching (BLAST)

Leonardo Mariño-Ramirez, Christoph W. Sensen
 Get Tutorial

17:00

Get-Together Party

ICGEB Foyer, 'W' Building

18:00

BUS TO HOTEL

 

 

TUESDAY, 26 June

08:30

Pick-up from Hotel

 

09:00

Multiple alignment, tree-building

Christoph W. Sensen, Technical University, Graz, Austria
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Phylogenetics

Christoph W. Sensen

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Phylogenetics

Christoph W. Sensen

18:00

BUS TO HOTEL

 

 

WEDNESDAY, 27 June

08:30

Pick-up from Hotel

 

09:00

Brief introduction to NGS technologies (Illumina, PacBio, Oxford Nanopore)


Genome annotation and Metagenomics

Sándor Pongor,

Christoph W. Sensen
 Get Tutorial

11:00

Coffee break and Group Photo

‘C’ Building, Area Science Park

11:30

Genome annotation and Metagenomics

Christoph W. Sensen

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Genome annotation and Metagenomics

Christoph W. Sensen

18:00

BUS TO HOTEL

 

 

THURSDAY, 28 June

08:30

Pick-up from Hotel

 

09:00

Proteomics

Michael P. Myers, ICGEB, Trieste
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Proteomics

Michael P. Myers

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Proteomics

Michael P. Myers

18:00

BUS TO HOTEL

 

 

FRIDAY, 29 June

08:30

Pick-up from Hotel

 

09:00

Chip-seq, RNA-seq, expression analysis

Leonardo Marino-Ramirez
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Chip-seq, RNA-seq, expression analysis

Leonardo Marino-Ramirez

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Chip-seq, RNA-seq, expression analysis

Leonardo Marino-Ramirez

18:00

Course Ends, BUS TO HOTEL

 

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