International Centre for Genetic Engineering and Biotechnology

Practical Course

"Bioinformatics: Computer Methods in Molecular and Systems Biology"

 


 

AREA Science Park - Trieste, ITALY

23 - 27 May 2016

 

PRELIMINARY PROGRAMME

 

 

 MONDAY, 23 May

08:00

Pick-up from Hotel Roma

 

08:30

Course Registration

ICGEB Foyer, 'W' Building

09:15

Welcome Address

ICGEB Seminar room, 'W' Building

09:30

Bioinformatics and knowledge representation: theoretical intro to the course

Sándor Pongor, Pázmány University, Budapest, HU
 Get Tutorial

10:45

Coffee break

‘C’ Building, Area Science Park

11:15

The course computer infrastructure

Sanjarbek Hudaiberdiev, NCBI, NIH, Bethesda, MD, US
 Get Tutorial

12:30

Bioinformatics Databases

Sándor Pongor
 Get Tutorial
13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Sequence analysis, database searching (BLAST)

Sanjarbek Hudaiberdiev
 Get Tutorial

17:00

Get-Together Party

ICGEB Foyer, 'W' Building

18:00

BUS TO HOTEL

 

 

TUESDAY, 24 May

08:30

Pick-up from Hotel

 

09:00

Intro to Linux (fun with UNIX)

Christoph W. Sensen, Technical University, Graz, Austria
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Multiple alignment, tree-building

Christoph W. Sensen

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Phylogenetics

Christoph W. Sensen

18:00

BUS TO HOTEL

 

 

WEDNESDAY, 25 May

08:30

Pick-up from Hotel

 

09:00

Next-generation sequencing data analysis using open source software

Leonardo Marino-Ramirez, NCBI, NIH, Bethesda, MD, US
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Next-generation sequencing data analysis using open source software

Leonardo Marino-Ramirez

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Next-generation sequencing data analysis using open source software

Leonardo Marino-Ramirez

18:00

BUS TO HOTEL

 

 

THURSDAY, 26 May

08:30

Pick-up from Hotel

 

09:00

Genome annotation and Metagenomics

Christoph W. Sensen
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Genome annotation and Metagenomics

Christoph W. Sensen

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Genome annotation and Metagenomics

Christoph W. Sensen

18:00

BUS TO HOTEL

 

 

FRIDAY, 27 May

08:30

Pick-up from Hotel

 

09:00

Chip-seq, RNA-seq, expression analysis

Leonardo Marino-Ramirez
 Get Tutorial

11:00

Coffee break

‘C’ Building, Area Science Park

11:30

Chip-seq, RNA-seq, expression analysis

Leonardo Marino-Ramirez

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Chip-seq, RNA-seq, expression analysis

Leonardo Marino-Ramirez

18:00

Course Ends, BUS TO HOTEL

 

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