International Centre for Genetic Engineering and Biotechnology

Practical Course

"Bioinformatics: Computer Methods in Molecular Biology"

 


Organized in the framework of the 2013 Italo-Hungarian International Year of Culture and Science

 

AREA Science Park - Trieste, ITALY

24 - 29 June 2013

 

PRELIMINARY PROGRAMME

 

 

 MONDAY, 24 June

08:00

Pick-up from Hotel Roma

 

08:30

Course Registration

ICGEB Foyer, W Building

09:15

Welcome Address

ICGEB Seminar Room, "W" Building
Sándor Pongor, (ICGEB, Trieste, Italy)

09:30

Bioinformatics and knowledge representation: theoretical intro to the course

Sándor Pongor  Get Tutorial

10:45

BREAK

 

11:15

The ICGEB computer system, course infrastructure

Informatics Laboratory, E3 Building

Dario Palmisano, Sándor Pongor (ICGEB, Trieste, Italy)

12:30

Sequence analysis, database searching

David Judge, University of Cambridge, UK
 Get Tutorial

13:30 LUNCH Cafeteria, Ground Floor, 'C' Building

14:30

Sequence analysis, database searching, (cont.)

David Judge

18:00

Get-Together Party

ICGEB Foyer, W Building

19:00

BUS TO HOTEL

 

 

TUESDAY, 25 June

08:30

Pick-up from Hotel

 

09:00

Sequence analysis, database searching, (cont.)

David Judge

11:00

BREAK

 

11:30

Sequence analysis, database searching, (cont.)

David Judge

13:30

LUNCH

Cafeteria, Ground Floor, 'C' Building

14:30

Sequence analysis, database searching, (cont.)

David Judge

18:00

BUS TO HOTEL

 

 

WEDNESDAY, 26 June

08:30

Pick-up from Hotel

 

09:00

Sequence analysis, database searching, (cont.)

David Judge

11:00

BREAK

 

11:30

Sequence analysis, database searching, (cont.)

David Judge

13:30

LUNCH

Cafeteria, Ground Floor, Building C

14:30


18:00

BUS TO HOTEL

 

 

THURSDAY, 27 June

08:30

Pick-up from Hotel

 

09:00

The European Bioinformatics Institute (EBI) services: searches, functional genomics and pathway databases

Paola Roncaglia EBI, Hinxton, UK
 Get Tutorial

11:00

BREAK

 

11:30

The EBI services (cont.)

Paola Roncaglia

13:30

LUNCH

Cafeteria, Ground Floor, Building C

14:30

The EBI services (cont.)

Paola Roncaglia

18:00

BUS TO HOTEL

 

 

FRIDAY, 28 June

08:30

Pick-up from Hotel

 

09:00

The National Center for Biotechnology Information (NCBI) services, nucleic acid databases

Leonardo Marino Ramirez, NCBI , NIH, Bethesda, MD, USA  Get Tutorial

11:00

BREAK

 

11:30

NCBI services (cont.)

Leonardo Marino Ramirez

13:30

LUNCH

Cafeteria, Ground Floor, Building C

14:30

Next-generation sequencing data analysis using open source software

Leonardo Marino Ramirez  Get Tutorial

18:00

BUS TO HOTEL

 

 

SATURDAY, 29 June

08:30

Pick-up from Hotel

 

09:00

Genome computing, phylogeny

Martin Bishop, Cambridge, UK, David Judge  Get Tutorial

10:30

BREAK

 

11:00

Genome computing, phylogeny (cont.)

Martin Bishop, David Judge

13:00

LUNCH

ICGEB premises, ‘W’ Building

14:00

Protein sequence databases, UniProt

Elisabeth Gasteiger , SIB Swiss Institute of Bioinformatics, Geneva, Switzerland
 Get Tutorial

18:00

BUS TO HOTEL

 


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